Eduardo Rossi and Paolo Santucci de Magistris, "Indirect Inference with Time Series Observed with Errors", Journal of Applied Econometrics, Vol. 33, No. 6, 2018, pp. 874-897. All files are stored in the file rm-files.zip. Data: Data are stored both in Matlab ("Data.mat") and ASCII ("Data.txt", comma separated) formats. Each file contains two series of 1008 observations on daily realized variance of JPMorgan computed both at 5 seconds and 5 minutes. Data files are in the folder "SV Estimation". There are two folders which contain a number of MATLAB functions used to generate the numerical and empirical results shown in the paper and in the Supplementary material. Codes: The folder "OU model" contains the MATLAB codes to reproduce the results of Table 1 in the Supplementary material. The code "Main OU" performs the Monte Carlo simulation of the Ornstein-Uhlenbeck process plus noise. A number of MATLAB functions are called to perform the indirect inference estimation. In particular, a) simulate_OU_exact.m: uses exact discretization to generate a trajectory for the OU model b) crude_discretrization_OLS.m: Adopts a crude discretization (AR1) to estimate the auxiliary coefficients c) indirect_inference_OU_crude_no_noise.m: Computes the criterion function for the II estimation when the noise is neglected d) indirect_inference_OU_crude_noise.m: Computes the criterion function for the II estimation when the noise is included among the structural features The folder "SV Estimation" contains the MATLAB codes and the RV data to reproduce the results of Table 2 in the article. In particular we consider the case of a contamination of the log-returns with a noise following an MA(1) process (the case with iid noise can be obtained restricting the MA parameter to 0). The main file "Main_MA_Noise_TF_Heston.m" loads the RV data for JPM contained in the file "Data.mat". The main file calls a number of functions: a) "HAR.m": estimates the HAR model of Corsi. b) "II_2FHeston_MA_noise.m": produces the criterion function used for the II estimation based on the two-factors Heston model contaminated by MA noise c) "simulate_heston_two_factor.m": generates trajectories for the two-factors Heston model d) "Binding_2FHeston_MA_noise.m": Approximates the binding function of the two-factors Heston model contaminated by MA noise. This is used to compute the Jacobian.